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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941938.1_cds_XP_016485619.1_76527
CDS Infomation

[gene=LOC107806019] [db_xref=GeneID:107806019] [protein=casein kinase I-like] [protein_id=XP_016485619.1] [location=join(32375..32450,32610..32650,33352..33421,33771..33919,34014..34109,34388..34458,36145..36206,36299..36362,36471..36555,36855..36981,37156..37229,37324..37387,37957..38090,38365..38631)] [gbkey=CDS]
Sequence

ATGGATCATGTTGTGGGTGGGAAGTTTAAGCTGGGAAGGAAGATTGGAAGTGGGTCTTTT
GGTGAACTTTATTTAGGTGTGAATATACAGAATGGAGAGGAAGTTGCTATTAAGCTGGAA
TCAGTCAAGACAAGGCACCCTCAACTACACTATGAGTCAAAAATTTATATGCTTCTCCAA
GGAGGAACCGGGATTCCTAATCTCAAATGGTTTGGAGTTGAGGGAGAGTACAATATAATG
GTCATTGACCTTCTTGGACCAAGTTTGGAAGACCTCTTCAACTATTGCAACAGGAAGTTT
ACTCTGAAAACAGTGCTTATGCTAGCAGATCAACTCATTAATAGAGTTGAATACATGCAC
TCTAGAGGATTTCTTCACCGTGACATAAAGCCAGACAACTTTTTAATGGGCTTAGGTCGC
AAGGCAAACCAGGTTTACGCCATTGACTTTGGGCTTGCCAAAAAGTATAGGGATCTCCAG
ACTCACAAGCATATACCATACAGGGAAAACAAGAATCTGACAGGAACAGCTCGGTATGCC
AGCGTCAACACACATCTCGGAGTTGAGCAAAGCAGAAGAGATGATTTGGAATCTCTTGGT
TATGTGCTTATGTATTTTCTTAGAGGAAGCCTTCCATGGCAGGGACTGAAAGCTGGTACC
AAGAAGCAGAAATATGATAAAATCAGTGAGAAAAAGATGTTAACACCAATAGAGGTGCTG
TGCAAATCATATCCATCTGAATTCATATCATACTTCCACTACTGCCGATCATTAAGATTT
GAGGATAAACCTGACTATTCATATTTGAAGAGGCTTTTTAGAGACTTGTTTATTCGTGAA
GGTTATCAATTTGACTATGTATTTGATTGGACAATTTTGAAGTATCCTCAGATCGGTGCC
AGTTCAAGAGGACGAATTCCTAGTGGGAACGCCGGACTAAATGCTGGGCCATCTGCTGAA
AGACCAGGAAGGACGTCAGTGGGGCAAGATATTCGAGACAAGTTTTCTGGCGCTGTTGAA
GCATTTTCCAGAAGGAATACTTCTGCGGCTGGTAGGCACGGGGAATACTCCAGACATCGG
ACTTCAGAGGATGTACCTTCATCTAAAGACGTGCAAGCTGATTCAGAAAGAGGCCGTACC
TCGAGAAATGGCAGCTCTTCAAGAAGGGCCGTCATTTCAAGCAGCAGACCGACCTCTTCT
GGTGAACCCACAGATAGTCGCTCAAGCAGATTAGTGTCGAGCACTGGCCGTCTATCTACC
ACACAGAGAATTCAGCAGGGAATCGAACCAAAGCCATCATCATTCTCCCGAACATCAGTC
ACAAAGGGTACCCATGATAACCCTCTTCGGAGCTTTGAGTTTCTTTCTATCAGAAAGTAA

Peptide Sequence

PEP ID

XP_016485619.1
PEP Infomation

PREDICTED: casein kinase I-like [Nicotiana tabacum]
Sequence

MDHVVGGKFKLGRKIGSGSFGELYLGVNIQNGEEVAIKLESVKTRHPQLHYESKIYMLLQ
GGTGIPNLKWFGVEGEYNIMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMH
SRGFLHRDIKPDNFLMGLGRKANQVYAIDFGLAKKYRDLQTHKHIPYRENKNLTGTARYA
SVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVL
CKSYPSEFISYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGA
SSRGRIPSGNAGLNAGPSAERPGRTSVGQDIRDKFSGAVEAFSRRNTSAAGRHGEYSRHR
TSEDVPSSKDVQADSERGRTSRNGSSSRRAVISSSRPTSSGEPTDSRSSRLVSSTGRLST
TQRIQQGIEPKPSSFSRTSVTKGTHDNPLRSFEFLSIRK

Transcript Sequence

Gene sequence data has not been registered.